Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q1RIY5 | Positive | 1158529 - 1159392 | 32832.9 |
| hypothetical protein | - | Not Available | Negative | 1159711 - 1161273 | 60549.1 |
| hypothetical protein | - | Not Available | Negative | 1161551 - 1162021 | 17915.8 |
| hypothetical protein | - | Not Available | Positive | 1162367 - 1162675 | 11784.2 |
| hypothetical protein | - | P43087 | Negative | 1162900 - 1163223 | 11905.5 |
| hypothetical protein | - | P45622 | Negative | 1163193 - 1163918 | 26658.4 |
| hypothetical protein | - | P43768 | Positive | 1164089 - 1164778 | 25543.2 |
| hypothetical protein | - | Q9RMT1 | Positive | 1164784 - 1165242 | 16852.8 |
| hypothetical protein | - | Not Available | Positive | 1165229 - 1166467 | 45562.6 |
| hypothetical protein | - | Q9ZDA2 | Negative | 1166560 - 1167351 | 29283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
