Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1140158 - 1140418 | 10059.5 |
| hypothetical protein | - | Not Available | Positive | 1141025 - 1141177 | 6019.25 |
| hypothetical protein | - | Not Available | Positive | 1141540 - 1141683 | 5360.82 |
| hypothetical protein | - | P27078 | Positive | 1141950 - 1142375 | 16596.2 |
| hypothetical protein | - | Q68WJ2 | Negative | 1142737 - 1144173 | 53503.2 |
| hypothetical protein | - | Q73IZ0 | Negative | 1144182 - 1144715 | 20532.6 |
| hypothetical protein | - | Not Available | Positive | 1145562 - 1145741 | 6948.41 |
| hypothetical protein | - | Not Available | Negative | 1146795 - 1147310 | 19831.9 |
| hypothetical protein | - | Not Available | Positive | 1147838 - 1147960 | 4443.35 |
| hypothetical protein | - | Not Available | Positive | 1148006 - 1148230 | 8639.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
