Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1024456 - 1025766 | 50279.1 |
| hypothetical protein | - | O30994 | Negative | 1025745 - 1026389 | 23882.0 |
| hypothetical protein | - | O51928 | Negative | 1026377 - 1026991 | 22602.3 |
| Trna-ser | Not Available | Not Available | Positive | 1027166 - 1027256 | Not Available |
| hypothetical protein | - | Q9ZD73 | Negative | 1027285 - 1027986 | 25894.0 |
| hypothetical protein | - | A7MGX6 | Positive | 1028224 - 1028487 | 9818.56 |
| hypothetical protein | - | B8DZS1 | Positive | 1028648 - 1029934 | 47662.3 |
| hypothetical protein | - | C3PNQ8 | Positive | 1029949 - 1030641 | 25919.8 |
| hypothetical protein | - | A8GWB2 | Positive | 1030716 - 1031219 | 18621.3 |
| hypothetical protein | - | Q57074 | Positive | 1031259 - 1031684 | 15048.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
