Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q168G2 | Positive | 867651 - 867890 | 8783.74 |
| hypothetical protein | - | Q2TBR0 | Positive | 868138 - 868296 | 5890.89 |
| hypothetical protein | - | Q168G2 | Positive | 868387 - 868740 | 13012.0 |
| hypothetical protein | - | Q9KDS9 | Positive | 869142 - 869390 | 9278.44 |
| hypothetical protein | - | Q5LUF3 | Positive | 869606 - 869926 | 12528.9 |
| hypothetical protein | - | Q5LUF3 | Positive | 869968 - 870093 | 4826.11 |
| hypothetical protein | - | P0DTA4 | Positive | 870147 - 870545 | 14947.1 |
| hypothetical protein | - | Not Available | Positive | 870777 - 870992 | 7916.67 |
| hypothetical protein | - | Not Available | Positive | 871151 - 871447 | 10890.2 |
| hypothetical protein | - | Not Available | Positive | 871504 - 871677 | 6697.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
