Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q52990 | Negative | 857454 - 858203 | 28613.2 |
| hypothetical protein | - | B3CRZ7 | Positive | 858496 - 858852 | 13704.8 |
| hypothetical protein | - | B3CRZ8 | Positive | 858898 - 859206 | 11615.2 |
| hypothetical protein | - | A5CCY5 | Positive | 859249 - 859776 | 19545.8 |
| hypothetical protein | - | Q1RGS8 | Positive | 860173 - 861405 | 46238.3 |
| hypothetical protein | - | Not Available | Positive | 862566 - 862754 | 7411.86 |
| Trna-gly | Not Available | Not Available | Positive | 863476 - 863550 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 863650 - 863725 | Not Available |
| hypothetical protein | - | Q92JL9 | Positive | 864606 - 865949 | 52048.8 |
| hypothetical protein | - | A5CFJ6 | Negative | 866183 - 867292 | 41068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
