Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | K7R23_03300 | P26979 | Positive | 724205 - 725638 | 53861.8 |
| ribosome hibernation promoting factor | K7R23_03305 | P26983 | Positive | 725661 - 725948 | 10863.0 |
| pts iia-like nitrogen regulatory protein ptsn | K7R23_03310 | P69829 | Positive | 726067 - 726558 | 17877.5 |
| rnase adapter rapz | K7R23_03315 | A8AQ96 | Positive | 726604 - 727458 | 32552.2 |
| pts phosphocarrier protein npr | K7R23_03320 | P0A9N2 | Positive | 727455 - 727727 | 9808.75 |
| phop regulatory network protein yrbl | K7R23_03325 | P64610 | Positive | 727923 - 728555 | 24261.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | K7R23_03330 | B5F6X7 | Negative | 728675 - 729394 | 26664.5 |
| isoprenoid biosynthesis glyoxalase elbb | K7R23_03335 | P0ABU5 | Negative | 729391 - 730044 | 22807.7 |
| aerobic respiration two-component sensor histidine kinase arcb | K7R23_03340 | P0AEC3 | Negative | 730273 - 732609 | 88029.1 |
| mannonate dehydratase | K7R23_03345 | A2RJK2 | Negative | 732789 - 733853 | 40488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

