Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid-binding protein mlac | K7R23_03250 | P0ADV7 | Negative | 716756 - 717391 | 23992.0 |
| outer membrane lipid asymmetry maintenance protein mlad | K7R23_03255 | P64605 | Negative | 717410 - 717961 | 19509.3 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | K7R23_03260 | P64608 | Negative | 717966 - 718748 | 27803.9 |
| phospholipid abc transporter atp-binding protein mlaf | K7R23_03265 | P63388 | Negative | 718756 - 719568 | 29163.6 |
| calcium/sodium antiporter | K7R23_03270 | P45394 | Positive | 719767 - 720744 | 34573.8 |
| sigma-54 dependent transcriptional regulator | K7R23_03275 | Q8ZLS1 | Positive | 720758 - 721743 | 35016.9 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | K7R23_03280 | P0ABZ5 | Positive | 721764 - 722330 | 19864.2 |
| lps export abc transporter periplasmic protein lptc | K7R23_03285 | P0ADW1 | Positive | 722327 - 722902 | 21514.7 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | K7R23_03290 | P0ADV3 | Positive | 722871 - 723425 | 20015.8 |
| lps export abc transporter atp-binding protein | K7R23_03295 | P0A9V3 | Positive | 723432 - 724157 | 26758.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

