Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | K7R23_03200 | B7LMY4 | Negative | 707606 - 709888 | 85719.0 |
| obg family gtpase cgta | K7R23_03205 | A8AQ74 | Negative | 710056 - 711228 | 43250.2 |
| dmt family transporter | K7R23_03210 | P0AA74 | Negative | 711244 - 712209 | 34919.2 |
| 50s ribosomal protein l27 | K7R23_03215 | A8AQ77 | Negative | 712339 - 712596 | 9141.02 |
| 50s ribosomal protein l21 | K7R23_03220 | A7ZS83 | Negative | 712616 - 712927 | 11565.0 |
| octaprenyl diphosphate synthase | K7R23_03225 | P0AD57 | Positive | 713187 - 714158 | 35187.1 |
| dna-binding transcriptional regulator sfsb | K7R23_03230 | P0ACH3 | Positive | 714382 - 714669 | 10782.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | K7R23_03235 | A7ZS86 | Negative | 714724 - 715983 | 44838.4 |
| bola family iron metabolism protein ibag | K7R23_03240 | P0A9W7 | Negative | 716037 - 716291 | 9581.53 |
| lipid asymmetry maintenance protein mlab | K7R23_03245 | P64602 | Negative | 716460 - 716756 | 10795.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

