Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin co-regulated pilus biosynthesis q family protein | K7R23_03150 | Not Available | Negative | 696339 - 696602 | 9952.96 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | K7R23_03155 | Not Available | Negative | 696801 - 698684 | 69499.9 |
| type iv pilus major pilin | K7R23_03160 | Q60153 | Negative | 698803 - 699510 | 24536.2 |
| phosphoglucosamine mutase | K7R23_03165 | A8AQ65 | Negative | 699920 - 701257 | 47676.6 |
| dihydropteroate synthase | K7R23_03170 | P0AC14 | Negative | 701250 - 702098 | 30772.3 |
| atp-dependent zinc metalloprotease ftsh | K7R23_03175 | P0AAI3 | Negative | 702185 - 704116 | 70893.5 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | K7R23_03180 | A8AQ68 | Negative | 704216 - 704845 | 23322.4 |
| ribosome assembly rna-binding protein yhby | K7R23_03185 | P0AGK6 | Positive | 704972 - 705265 | 10787.5 |
| transcription elongation factor grea | K7R23_03190 | P64282 | Negative | 705421 - 705897 | 17649.9 |
| serine-type d-ala-d-ala carboxypeptidase | K7R23_03195 | P24228 | Positive | 706141 - 707574 | 51775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

