Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | K7R23_03050 | B5F6T5 | Negative | 675137 - 675406 | 10198.3 |
| trna pseudouridine(55) synthase trub | K7R23_03055 | P60342 | Negative | 675560 - 676504 | 35045.2 |
| 30s ribosome-binding factor rbfa | K7R23_03060 | A9MP37 | Negative | 676504 - 676905 | 15182.4 |
| translation initiation factor if-2 | K7R23_03065 | A8AQ58 | Negative | 677062 - 679746 | 97564.8 |
| transcription termination factor nusa | K7R23_03070 | P0AFF8 | Negative | 679771 - 681258 | 54931.2 |
| ribosome maturation factor rimp | K7R23_03075 | A8AQ61 | Negative | 681287 - 681739 | 16655.9 |
| Trna-met | Not Available | Not Available | Positive | 681947 - 682023 | Not Available |
| argininosuccinate synthase | K7R23_03085 | A8AQ63 | Positive | 682320 - 683663 | 49949.4 |
| glycoside hydrolase family 18 protein | K7R23_03090 | P20533 | Positive | 684030 - 686321 | 84715.5 |
| Trna-leu | Not Available | Not Available | Positive | 686639 - 686725 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

