Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | K7R23_03000 | P63419 | Negative | 663775 - 664278 | 18560.8 |
| scp2 domain-containing protein | K7R23_03005 | P64601 | Negative | 664272 - 664796 | 19656.9 |
| u32 family peptidase | K7R23_03010 | P45527 | Positive | 665017 - 666012 | 36909.1 |
| u32 family peptidase | K7R23_03015 | P45475 | Positive | 666003 - 666899 | 33217.9 |
| llm class flavin-dependent oxidoreductase | K7R23_03020 | P0ADV6 | Positive | 667220 - 668227 | 37077.4 |
| tryptophan permease | K7R23_03025 | P0AAD2 | Negative | 668316 - 669560 | 44518.4 |
| atp-dependent rna helicase dead | K7R23_03030 | Q8XA87 | Negative | 669705 - 671585 | 70194.1 |
| protein yrbn | K7R23_03035 | C1P618 | Negative | 671578 - 671658 | 2979.59 |
| lipoprotein nlpi | K7R23_03040 | B7NDE9 | Negative | 671764 - 672648 | 33557.4 |
| polyribonucleotide nucleotidyltransferase | K7R23_03045 | A8AQ53 | Negative | 672758 - 674893 | 76951.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

