Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | K7R23_02950 | P67088 | Negative | 655802 - 656662 | 31470.8 |
| penicillin-binding protein activator | K7R23_02955 | Q0T0D4 | Positive | 656727 - 658778 | 72558.2 |
| yran family protein | K7R23_02960 | B5F6R8 | Positive | 658736 - 659131 | 14806.6 |
| dnaa initiator-associating protein diaa | K7R23_02965 | B5F6R9 | Positive | 659151 - 659741 | 21124.4 |
| divisome-associated lipoprotein yrap | K7R23_02970 | P64598 | Positive | 659751 - 660326 | 19999.1 |
| permease | K7R23_02975 | P45468 | Negative | 660420 - 661457 | 37243.9 |
| nad(p)h-binding protein | K7R23_02980 | P45469 | Negative | 661735 - 662373 | 23235.4 |
| type 1 glutamine amidotransferase | K7R23_02985 | P45470 | Positive | 662502 - 663020 | 18813.4 |
| yhbp family protein | K7R23_02990 | B7N0T9 | Negative | 663000 - 663443 | 16716.0 |
| giy-yig nuclease family protein | K7R23_02995 | B7M063 | Positive | 663495 - 663788 | 10971.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

