Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate 2-kinase | K7R23_02605 | P23524 | Negative | 603658 - 604803 | 39358.3 |
| 2-hydroxy-3-oxopropionate reductase | K7R23_02610 | P0ABQ3 | Negative | 604904 - 605794 | 30616.6 |
| 2-dehydro-3-deoxyglucarate aldolase | K7R23_02615 | A8AQ14 | Negative | 605825 - 606595 | 27351.6 |
| galactarate dehydratase | K7R23_02620 | P39829 | Positive | 607108 - 608679 | 56307.7 |
| tagatose bisphosphate family class ii aldolase | K7R23_02625 | B4TWB0 | Positive | 608860 - 609714 | 30889.0 |
| tagatose-bisphosphate aldolase subunit gatz | K7R23_02630 | B4T6C0 | Positive | 609766 - 611037 | 46919.1 |
| pts galactitol transporter subunit iia | K7R23_02635 | P69814 | Positive | 611052 - 611516 | 16791.3 |
| pts galactitol transporter subunit iib | K7R23_02640 | P0A436 | Positive | 611546 - 611830 | 10044.3 |
| pts galactitol transporter subunit iic | K7R23_02645 | P69832 | Positive | 611835 - 613208 | 49107.9 |
| sigma-54 dependent transcriptional regulator | K7R23_02650 | P0A9S4 | Positive | 613252 - 613698 | 16218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

