Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host nuclease inhibitor protein | K7R23_02890 | P06023 | Negative | 647764 - 648294 | 19569.4 |
| hypothetical protein | K7R23_02895 | Not Available | Negative | 648306 - 648599 | 10828.8 |
| hypothetical protein | K7R23_02900 | Not Available | Negative | 648604 - 648879 | 9964.04 |
| hypothetical protein | K7R23_02905 | Not Available | Negative | 648954 - 649184 | 8637.49 |
| hypothetical protein | K7R23_02910 | Not Available | Negative | 649171 - 649590 | 16678.8 |
| hypothetical protein | K7R23_02915 | Not Available | Negative | 649603 - 649824 | 8320.91 |
| Transposase b | K7R23_02920 | P03763 | Negative | 649827 - 650759 | 33641.6 |
| Phage transposase | K7R23_02925 | P07636 | Negative | 650835 - 652922 | 79995.5 |
| Ner | K7R23_02930 | P06020 | Negative | 652925 - 653155 | 8713.57 |
| helix-turn-helix domain containing protein | K7R23_02935 | Not Available | Positive | 653332 - 653886 | 20989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

