Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqjk-like family protein | K7R23_02455 | Q47710 | Positive | 561189 - 561473 | 10960.3 |
| doxx family protein | K7R23_02460 | P42619 | Positive | 561708 - 562100 | 14054.8 |
| sigma-54 dependent transcriptional regulator | K7R23_02465 | Not Available | Positive | 562377 - 562541 | 6160.36 |
| sigma-54 dependent transcriptional regulator | K7R23_02470 | Not Available | Positive | 562624 - 563153 | 19293.4 |
| sigma-54 dependent transcriptional regulator | K7R23_02475 | P75679 | Negative | 563156 - 563958 | 27985.9 |
| duf4765 family protein | K7R23_02480 | Not Available | Positive | 564455 - 567835 | 128659.0 |
| sigma-54 dependent transcriptional regulator | K7R23_02485 | P15026 | Positive | 568294 - 568665 | 13896.0 |
| sigma-54 dependent transcriptional regulator | K7R23_02490 | Q79E92 | Positive | 568704 - 569401 | 24767.4 |
| sigma-54 dependent transcriptional regulator | K7R23_02495 | Not Available | Positive | 569640 - 579730 | 369474.0 |
| is66 family insertion sequence hypothetical protein | K7R23_02500 | P0CF49 | Positive | 580158 - 580835 | 25237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

