Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | K7R23_02355 | P64588 | Positive | 538548 - 539078 | 19888.7 |
| mcp four helix bundle domain-containing protein | K7R23_02360 | P21823 | Negative | 539075 - 540640 | 56732.2 |
| pas domain-containing protein | K7R23_02365 | P50466 | Negative | 540908 - 542428 | 54850.3 |
| putrescine aminotransferase | K7R23_02370 | A8APX8 | Positive | 542858 - 544237 | 49655.0 |
| nadph-dependent 2,4-dienoyl-coa reductase | K7R23_02375 | P42593 | Positive | 544463 - 546481 | 72366.2 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | K7R23_02380 | A8APY0 | Negative | 546618 - 547754 | 42037.4 |
| m48 family metallopeptidase | K7R23_02385 | P42597 | Positive | 547838 - 548341 | 19384.6 |
| gfo/idh/moca family oxidoreductase | K7R23_02390 | P42599 | Positive | 548412 - 549410 | 36563.4 |
| terc family protein | K7R23_02395 | Q8ZLX2 | Positive | 549683 - 550648 | 35992.2 |
| serine/threonine transporter sstt | K7R23_02400 | B5F6N2 | Positive | 550883 - 552127 | 43425.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

