Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_02305 | Not Available | Negative | 508533 - 510206 | 63668.8 |
| sdia-regulated domain-containing protein | K7R23_02310 | Q8XB94 | Positive | 510386 - 511255 | 32490.1 |
| mfs transporter | K7R23_02315 | P39381 | Positive | 511331 - 512524 | 41876.8 |
| hlyd family type i secretion periplasmic adaptor subunit | K7R23_02320 | Q7ANN5 | Negative | 512526 - 513701 | 43573.6 |
| type i secretion system permease/atpase | K7R23_02325 | Q46717 | Negative | 513703 - 515886 | 81080.9 |
| sigma-54 dependent transcriptional regulator | K7R23_02330 | P50899 | Negative | 516076 - 534018 | 595985.0 |
| tolc family outer membrane protein | K7R23_02335 | Q54001 | Negative | 534101 - 535405 | 47084.6 |
| sigma-54 dependent transcriptional regulator | K7R23_02340 | Not Available | Negative | 536152 - 536475 | 12666.1 |
| hypothetical protein | K7R23_02345 | Not Available | Negative | 536700 - 537155 | 17980.5 |
| siderophore-interacting protein | K7R23_02350 | Q46871 | Negative | 537557 - 538324 | 28810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

