Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_02255 | Not Available | Positive | 497870 - 498106 | 9301.31 |
| arac family transcriptional regulator | K7R23_02260 | O31449 | Positive | 498123 - 498938 | 30795.7 |
| lyse family transporter | K7R23_02265 | Q8Z3B3 | Positive | 498987 - 499649 | 23630.9 |
| multidrug efflux mfs transporter mdtm | K7R23_02270 | Q8XB84 | Positive | 499957 - 501189 | 44475.7 |
| cystathionine beta-lyase | K7R23_02275 | P06721 | Negative | 501239 - 502429 | 43302.8 |
| dicarboxylate/amino acid:cation symporter | K7R23_02280 | O59010 | Negative | 502457 - 503689 | 42973.4 |
| lysr family transcriptional regulator | K7R23_02285 | P30864 | Positive | 503916 - 504842 | 34433.5 |
| duf445 domain-containing protein | K7R23_02290 | P39385 | Positive | 504887 - 506158 | 47701.9 |
| glycoside hydrolase family 88 protein | K7R23_02295 | O31521 | Negative | 506204 - 507277 | 40330.2 |
| hypothetical protein | K7R23_02300 | Not Available | Negative | 507264 - 508304 | 39257.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

