Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iib | K7R23_02155 | P37081 | Negative | 473309 - 473770 | 17085.7 |
| pts sugar transporter subunit iia | K7R23_02160 | P69799 | Negative | 473785 - 474207 | 15604.6 |
| sigma 54-interacting transcriptional regulator | K7R23_02165 | D0ZLR9 | Negative | 474309 - 477074 | 103473.0 |
| zinc-binding alcohol dehydrogenase family protein | K7R23_02170 | P39400 | Negative | 477235 - 478257 | 36212.8 |
| gntr family transcriptional regulator | K7R23_02175 | P39399 | Positive | 478398 - 479312 | 35252.2 |
| mfs transporter | K7R23_02180 | P39398 | Positive | 479531 - 480892 | 49327.4 |
| methyl-accepting chemotaxis protein | K7R23_02185 | P02942 | Negative | 480951 - 482615 | 60124.0 |
| murr/rpir family transcriptional regulator | K7R23_02190 | O68281 | Positive | 482762 - 483625 | 31352.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | K7R23_02195 | Q6BF16 | Negative | 483622 - 484227 | 20891.4 |
| 2-dehydro-3-deoxygalactonokinase | K7R23_02200 | P31459 | Negative | 484217 - 485089 | 32180.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

