Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine exporter thre family protein | K7R23_02105 | P0ADD5 | Positive | 463743 - 464519 | 28413.2 |
| threonine/serine exporter | K7R23_02110 | A8AM03 | Positive | 464510 - 464983 | 17084.6 |
| primosomal protein dnat | K7R23_02115 | B7UQZ1 | Positive | 465083 - 465622 | 19486.1 |
| dna replication protein dnac | K7R23_02120 | P0AEF2 | Positive | 465625 - 466362 | 28006.9 |
| duf2501 domain-containing protein | K7R23_02125 | P18390 | Positive | 466457 - 466951 | 17037.3 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | K7R23_02130 | B5FTA1 | Positive | 467226 - 469517 | 85209.5 |
| sis domain-containing protein | K7R23_02135 | O32157 | Negative | 469575 - 470585 | 38314.0 |
| sis domain-containing protein | K7R23_02140 | Q7NIG8 | Negative | 470604 - 471665 | 39185.2 |
| sigma-54 dependent transcriptional regulator | K7R23_02145 | P69805 | Negative | 471678 - 472526 | 31245.9 |
| pts mannose/fructose/sorbose/n-acetylgalactosamine transporter subunit iic | K7R23_02150 | P26381 | Negative | 472504 - 473283 | 26757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

