Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 456871 - 456957 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 456990 - 457076 | Not Available |
| duf1435 domain-containing protein | K7R23_02065 | P55914 | Negative | 457116 - 457391 | 9759.66 |
| ggdef domain-containing protein | K7R23_02070 | Q9KKZ4 | Positive | 457602 - 458666 | 39573.6 |
| siderophore-iron reductase fhuf | K7R23_02075 | P39405 | Positive | 458779 - 459567 | 30126.4 |
| dna-binding transcriptional activator bglj | K7R23_02080 | P39404 | Negative | 459784 - 460416 | 23887.1 |
| luxr c-terminal-related transcriptional regulator | K7R23_02085 | P0ADD8 | Negative | 460377 - 461099 | 27253.1 |
| helix-turn-helix domain-containing protein | K7R23_02090 | Q05587 | Negative | 461362 - 462246 | 34614.2 |
| 4-hydroxybenzoate 3-monooxygenase | K7R23_02095 | P20586 | Negative | 462262 - 463446 | 44744.6 |
| hypothetical protein | K7R23_02100 | Not Available | Negative | 463471 - 463638 | 6445.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

