Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Regulator of late transcription | K7R23_02840 | P06022 | Negative | 642003 - 642425 | 16222.3 |
| Issod7, transposase | K7R23_02845 | P30192 | Negative | 642494 - 643831 | 50735.4 |
| Hypothetical protein | K7R23_02850 | P24796 | Negative | 643937 - 644449 | 19388.4 |
| hypothetical protein | K7R23_02855 | Not Available | Positive | 644520 - 644759 | 8559.11 |
| Hypothetical protein | K7R23_02860 | P24795 | Negative | 644740 - 645027 | 11098.5 |
| hypothetical protein | K7R23_02865 | Not Available | Negative | 645165 - 645497 | 12111.3 |
| Gp103 | K7R23_02870 | Not Available | Negative | 645494 - 646045 | 21353.0 |
| Hypothetical protein | K7R23_02875 | Q38488 | Negative | 646049 - 646564 | 19880.8 |
| Hypothetical protein | K7R23_02880 | Q9T1X7 | Negative | 646564 - 647097 | 19787.1 |
| Hypothetical protein | K7R23_02885 | P44214 | Negative | 647101 - 647679 | 22290.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

