Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | K7R23_01905 | P0AGB1 | Negative | 425306 - 426274 | 35060.7 |
| ytjb family periplasmic protein | K7R23_01910 | P60777 | Positive | 426392 - 427036 | 24133.3 |
| lipoate--protein ligase lpla | K7R23_01915 | B1LEJ1 | Positive | 427057 - 428073 | 37747.6 |
| duf1120 domain-containing protein | K7R23_01920 | P45422 | Positive | 428264 - 428953 | 23098.1 |
| purine-nucleoside phosphorylase | K7R23_01925 | A8ALX7 | Negative | 429025 - 429744 | 25991.4 |
| phosphopentomutase | K7R23_01930 | B5Y275 | Negative | 429847 - 431070 | 44031.2 |
| thymidine phosphorylase | K7R23_01935 | B5Y276 | Negative | 431122 - 432444 | 46926.6 |
| deoxyribose-phosphate aldolase | K7R23_01940 | B5FTC5 | Negative | 432601 - 433380 | 27826.4 |
| yjji family glycine radical enzyme | K7R23_01945 | P37342 | Positive | 433642 - 435192 | 57553.7 |
| yjjw family glycine radical enzyme activase | K7R23_01950 | P39409 | Positive | 435164 - 436027 | 31643.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

