Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n(4)-acetylcytidine aminohydrolase | K7R23_01805 | Q57K65 | Negative | 403941 - 404252 | 12052.3 |
| sigma-54 dependent transcriptional regulator | K7R23_01810 | Q46829 | Positive | 404442 - 405876 | 51631.0 |
| aminomethyl-transferring glycine dehydrogenase | K7R23_01815 | A8APB1 | Negative | 406017 - 408890 | 104189.0 |
| glycine cleavage system protein gcvh | K7R23_01820 | B7LF90 | Negative | 409063 - 409452 | 13798.8 |
| glycine cleavage system aminomethyltransferase gcvt | K7R23_01825 | Q57K60 | Negative | 409478 - 410572 | 40212.1 |
| fad-dependent 2-octaprenylphenol hydroxylase | K7R23_01830 | P25535 | Negative | 411022 - 412224 | 44118.1 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | K7R23_01835 | P25534 | Negative | 412468 - 413646 | 42089.8 |
| xaa-pro aminopeptidase | K7R23_01840 | P15034 | Negative | 413643 - 414959 | 49478.6 |
| yeca family protein | K7R23_01845 | B5F5I5 | Negative | 414987 - 415565 | 21236.9 |
| cell division protein zapa | K7R23_01850 | A8APC0 | Positive | 415733 - 416062 | 12498.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

