Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_01610 | Not Available | Positive | 368313 - 368885 | 22154.1 |
| sigma-54 dependent transcriptional regulator | K7R23_01615 | P03832 | Positive | 369094 - 369195 | 3937.77 |
| transcriptional regulator | K7R23_01620 | Not Available | Positive | 370381 - 371400 | 40233.8 |
| gtpase family protein | K7R23_01625 | P76359 | Positive | 371510 - 372382 | 32516.8 |
| ag43/cah family autotransporter adhesin | K7R23_01630 | P39180 | Positive | 372755 - 375601 | 97531.5 |
| flavodoxin fldb | K7R23_01780 | P0ABY6 | Positive | 400578 - 401099 | 19611.2 |
| protein ygfx | K7R23_01785 | Q46824 | Negative | 401143 - 401550 | 15757.6 |
| fad assembly factor sdhe | K7R23_01790 | P64561 | Negative | 401531 - 401797 | 10498.7 |
| pp_00353 | K7R23_01795 | Not Available | Positive | 402054 - 403034 | Not Available |
| hemolysin iii family protein | K7R23_01800 | P67155 | Negative | 403116 - 403778 | 23844.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

