Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shlb/fhac/hecb family hemolysin secretion/activation protein | K7R23_01560 | Q7CGD8 | Negative | 359763 - 361415 | 61568.7 |
| duf4222 domain-containing protein | K7R23_01565 | Not Available | Positive | 362055 - 362261 | 8076.68 |
| hypothetical protein | K7R23_01570 | Not Available | Negative | 362314 - 362547 | 8987.3 |
| dna-binding protein | K7R23_01575 | Not Available | Negative | 362643 - 363266 | 23857.7 |
| is3-like element is3 family transposase | K7R23_01580 | P0CF79 | Negative | 363375 - 364537 | 45023.8 |
| sigma-54 dependent transcriptional regulator | K7R23_01585 | Not Available | Negative | 364835 - 365247 | 15287.9 |
| zinc-ribbon domain-containing protein | K7R23_01590 | Not Available | Negative | 365244 - 365627 | 14977.5 |
| inovirus gp2 family protein | K7R23_01595 | P77657 | Negative | 365888 - 366457 | 21655.0 |
| hemolysin expression modulator hha | K7R23_01600 | P0ACE5 | Negative | 367108 - 367320 | 8340.97 |
| alpa family transcriptional regulator | K7R23_01605 | P12552 | Positive | 368021 - 368227 | 7800.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

