Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_01510 | Not Available | Negative | 341321 - 342883 | 58297.2 |
| sigma-54 dependent transcriptional regulator | K7R23_01515 | Not Available | Negative | 343122 - 344486 | 51477.9 |
| nerd domain-containing protein/dead/deah box helicase | K7R23_01520 | Not Available | Negative | 344912 - 346657 | 66007.1 |
| ail/lom family protein | K7R23_01525 | P23988 | Negative | 346835 - 347410 | 21168.7 |
| duf596 domain-containing protein | K7R23_01530 | Not Available | Negative | 348326 - 348676 | 13563.8 |
| sigma-54 dependent transcriptional regulator | K7R23_01535 | Not Available | Negative | 348682 - 349224 | 19821.9 |
| hypothetical protein | K7R23_01540 | Not Available | Negative | 349386 - 349721 | 12765.8 |
| hypothetical protein | K7R23_01545 | Not Available | Negative | 349934 - 350395 | 17633.1 |
| hemagglutinin repeat-containing protein | K7R23_01550 | Q7CGD9 | Negative | 350382 - 359210 | 304016.0 |
| toxin-activating lysine-acyltransferase | K7R23_01555 | P16461 | Negative | 359226 - 359753 | 20337.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

