Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | K7R23_01460 | P50360 | Positive | 330877 - 331320 | 16799.4 |
| nucleotidyltransferase | K7R23_01465 | P0DTF7 | Positive | 331455 - 332783 | 50977.8 |
| sigma-54 dependent transcriptional regulator | K7R23_01470 | Not Available | Positive | 332791 - 333365 | 21745.3 |
| is66 family insertion sequence hypothetical protein | K7R23_01475 | P55640 | Positive | 333453 - 334103 | 24283.4 |
| is66 family insertion sequence element accessory protein tnpb | K7R23_01480 | P50359 | Positive | 334103 - 334450 | 13011.0 |
| is66 family transposase | K7R23_01485 | P50360 | Positive | 334470 - 336041 | 58608.1 |
| tatd family hydrolase | K7R23_01490 | Q503T5 | Negative | 336630 - 337355 | 26865.5 |
| dna-binding protein | K7R23_01495 | Not Available | Negative | 337352 - 338671 | 48815.9 |
| hypothetical protein | K7R23_01500 | Not Available | Negative | 338653 - 339405 | 26810.9 |
| kap family p-loop domain protein | K7R23_01505 | Q57641 | Negative | 339405 - 341189 | 65959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

