Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion morphogenesis late f orf | K7R23_02790 | Q01259 | Negative | 634801 - 636132 | 49803.7 |
| Portal protein | K7R23_02795 | Q9T1W5 | Negative | 636116 - 637705 | 58480.6 |
| Putative portal protein | K7R23_02800 | Q9T1W6 | Negative | 637705 - 639369 | 62892.6 |
| Hypothetical protein | K7R23_02805 | Q9T1W7 | Negative | 639369 - 639950 | 21895.6 |
| Hypothetical protein | K7R23_02810 | Q9T1W8 | Negative | 639953 - 640243 | 10710.7 |
| Hypothetical protein | K7R23_02815 | Q9T1W9 | Negative | 640236 - 640547 | 11677.2 |
| Tail tube protein | K7R23_02820 | Q06424 | Negative | 640528 - 640755 | 8207.86 |
| Rz1 lytic protein | K7R23_02825 | P0DTL7 | Negative | 640766 - 640984 | 7898.59 |
| Hypothetical protein | K7R23_02830 | Not Available | Negative | 640968 - 641396 | 15232.5 |
| Hypothetical protein | K7R23_02835 | Q9T1X2 | Negative | 641431 - 641931 | 18603.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

