Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyisourate hydrolase | K7R23_01310 | Q8Z7Q6 | Negative | 306150 - 306560 | 14983.9 |
| response regulator transcription factor hprr | K7R23_01315 | P76340 | Positive | 306695 - 307375 | 25434.6 |
| heavy metal sensor histidine kinase | K7R23_01320 | P76339 | Positive | 307365 - 308717 | 49871.4 |
| sprt family zinc-dependent metalloprotease | K7R23_01325 | A9MRC8 | Positive | 308762 - 309262 | 19389.7 |
| deoxyribonuclease i | K7R23_01330 | P25736 | Positive | 309354 - 310061 | 26718.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | K7R23_01335 | P0AGL8 | Positive | 310135 - 310866 | 27055.8 |
| glutathione synthase | K7R23_01340 | A0A482PU20 | Positive | 310879 - 311826 | 35290.6 |
| yqge/algh family protein | K7R23_01345 | A8APG7 | Positive | 312016 - 312579 | 20640.9 |
| holliday junction resolvase ruvx | K7R23_01350 | A8APG8 | Positive | 312579 - 312995 | 15094.1 |
| type iv pilus twitching motility protein pilt | K7R23_01355 | P52052 | Negative | 313031 - 314011 | 35910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

