Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | K7R23_01260 | Q2JZQ2 | Positive | 295150 - 295944 | 29414.2 |
| transketolase | K7R23_01265 | P27302 | Negative | 296067 - 298058 | 71763.0 |
| m48 family metallopeptidase | K7R23_01270 | P25894 | Positive | 298337 - 299095 | 26646.8 |
| agmatinase | K7R23_01275 | B7UHY3 | Negative | 299225 - 300145 | 33554.9 |
| biosynthetic arginine decarboxylase | K7R23_01280 | Q8XCX9 | Negative | 300290 - 302266 | 73831.8 |
| acid stress response protein yqgb | K7R23_01285 | P64569 | Negative | 302275 - 302406 | 4845.95 |
| hypothetical protein | K7R23_01290 | P64571 | Positive | 302544 - 302702 | 5892.15 |
| hypothetical protein | K7R23_01295 | P46879 | Negative | 302655 - 302987 | 12455.5 |
| methionine adenosyltransferase | K7R23_01300 | A7ZR64 | Positive | 303126 - 304280 | 41943.9 |
| galactose/proton symporter | K7R23_01305 | P0AEP2 | Positive | 304704 - 306098 | 51067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

