Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimd/papc n-terminal domain-containing protein | K7R23_01210 | Not Available | Negative | 285084 - 285401 | 12030.7 |
| fimbria/pilus periplasmic chaperone | K7R23_01215 | P33128 | Negative | 285425 - 286162 | 27719.4 |
| type 1 fimbrial protein | K7R23_01220 | P11312 | Negative | 286215 - 286781 | 19543.7 |
| transketolase | K7R23_01225 | P27302 | Negative | 287158 - 289155 | 72049.5 |
| transaldolase | K7R23_01230 | Q6D8W0 | Negative | 289183 - 290133 | 35045.0 |
| ribose 5-phosphate isomerase b | K7R23_01235 | Q6D8V9 | Negative | 290149 - 290622 | 16970.0 |
| pts glucitol/sorbitol transporter subunit iia | K7R23_01240 | P59784 | Negative | 290667 - 291032 | 13132.0 |
| 2-keto-3-deoxygluconate permease | K7R23_01245 | P65208 | Negative | 291034 - 292050 | 35041.1 |
| four-carbon acid sugar kinase family protein | K7R23_01250 | B0TBI9 | Negative | 292143 - 293861 | 61513.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | K7R23_01255 | A7FVM3 | Negative | 293897 - 294904 | 36658.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

