Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2877 domain-containing protein | K7R23_01160 | P0AAS6 | Negative | 269854 - 270681 | 29963.6 |
| duf1116 domain-containing protein | K7R23_01165 | P77129 | Negative | 270742 - 272004 | 44635.9 |
| acyl-coa synthetase fdra | K7R23_01170 | Q47208 | Negative | 272021 - 273682 | 58236.5 |
| mfs transporter | K7R23_01175 | P42237 | Negative | 273695 - 274918 | 44538.3 |
| carbamate kinase | K7R23_01180 | P37306 | Positive | 275223 - 276128 | 31955.4 |
| class ii fructose-bisphosphate aldolase | K7R23_01185 | P0AB72 | Negative | 276236 - 277315 | 39178.5 |
| phosphoglycerate kinase | K7R23_01190 | B5F5J4 | Negative | 277412 - 278575 | 41035.4 |
| sigma-54 dependent transcriptional regulator | K7R23_01195 | A9MRF0 | Negative | 278627 - 279647 | 36963.3 |
| hemagglutinin repeat-containing protein | K7R23_01200 | P12255 | Negative | 279982 - 284115 | 143544.0 |
| is5 family transposase | K7R23_01205 | P03009 | Positive | 284074 - 285042 | 36556.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

