Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr efflux pump acrab transcriptional activator roba | K7R23_01110 | P0ACI1 | Positive | 259721 - 260590 | 33091.7 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmb | K7R23_01115 | A8ALW1 | Negative | 260587 - 261234 | 23972.6 |
| inosine/xanthosine triphosphatase | K7R23_01120 | A8ALW2 | Positive | 261305 - 261817 | 18142.5 |
| trp operon repressor | K7R23_01125 | P39440 | Negative | 261880 - 262206 | 12436.0 |
| murein transglycosylase | K7R23_01130 | P0AGC4 | Negative | 262263 - 264200 | 73673.2 |
| energy-dependent translational throttle protein etta | K7R23_01135 | P0A9W4 | Positive | 264516 - 266183 | 62274.3 |
| oxidative stress defense protein | K7R23_01140 | P0ADS7 | Negative | 266315 - 267058 | 26605.5 |
| arginine exporter argo | K7R23_01145 | B4TV35 | Negative | 267151 - 267786 | 23268.3 |
| small-conductance mechanosensitive channel mscs | K7R23_01150 | P0C0S2 | Negative | 267976 - 268836 | 31021.0 |
| hth-type transcriptional activator alls | K7R23_01155 | P0ACR1 | Negative | 268959 - 269897 | 35224.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

