Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | K7R23_01060 | A9MR86 | Negative | 249623 - 250552 | 33168.0 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | K7R23_01065 | P00561 | Negative | 250555 - 253017 | 88900.4 |
| thr operon leader peptide | K7R23_01070 | B7UI46 | Negative | 253099 - 253164 | 2138.61 |
| sigma-54 dependent transcriptional regulator | K7R23_01075 | Not Available | Negative | 253377 - 254061 | 23760.4 |
| hypothetical protein | K7R23_01080 | P0ADE0 | Negative | 254449 - 254589 | 4871.12 |
| two-component system response regulator arca | K7R23_01085 | P0A9Q3 | Positive | 254685 - 255401 | 27292.7 |
| cell envelope integrity protein cred | K7R23_01090 | P08369 | Negative | 255466 - 256851 | 50731.9 |
| two-component system sensor histidine kinase crec | K7R23_01095 | P08401 | Negative | 256910 - 258334 | 52110.3 |
| two-component system response regulator creb | K7R23_01100 | P08368 | Negative | 258334 - 259023 | 26069.5 |
| protein crea | K7R23_01105 | P0AE93 | Negative | 259036 - 259509 | 17036.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

