Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | K7R23_02740 | P79679 | Negative | 628382 - 628747 | 12807.8 |
| Putative tail sheath protein | K7R23_02745 | P79678 | Negative | 628756 - 630237 | 53953.6 |
| Hypothetical protein | K7R23_02750 | P79677 | Negative | 630237 - 630515 | 9455.08 |
| Hypothetical protein | K7R23_02755 | Q9T1V8 | Negative | 630519 - 631082 | 20902.6 |
| Hypothetical protein | K7R23_02760 | Q9T1V9 | Negative | 631079 - 631498 | 15499.3 |
| Hypothetical protein | K7R23_02765 | Q9T1W0 | Negative | 631495 - 631914 | 14701.0 |
| Putative major head subunit | K7R23_02770 | Q9T1W1 | Negative | 631958 - 632905 | 34920.6 |
| Putative protease protein | K7R23_02775 | Q01267 | Negative | 632905 - 634029 | 40290.8 |
| Putative virion morphogenesis protein | K7R23_02780 | Q01261 | Negative | 634206 - 634679 | 17515.7 |
| Trna-other; | Not Available | Not Available | Positive | 634720 - 634799 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

