Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system protein kefc | K7R23_00810 | A8ALQ4 | Negative | 187538 - 189412 | 67466.4 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | K7R23_00815 | Q0T8E9 | Negative | 189405 - 189935 | 20252.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | K7R23_00820 | P77286 | Positive | 190321 - 193188 | 99966.2 |
| ygdi/ygdr family lipoprotein | K7R23_00825 | P65293 | Negative | 193241 - 193474 | 8346.74 |
| mfs transporter | K7R23_00830 | P31679 | Negative | 193579 - 194910 | 48736.9 |
| is110-like element iscro4 family transposase | K7R23_00835 | P20665 | Positive | 195156 - 196136 | 36404.0 |
| ferredoxin-like protein fixx | K7R23_00840 | P68648 | Negative | 196312 - 196599 | 10690.7 |
| fad-dependent oxidoreductase | K7R23_00845 | Q8Z9K9 | Negative | 196596 - 197882 | 45657.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | K7R23_00850 | B5F757 | Negative | 197904 - 198845 | 33492.1 |
| electron transfer flavoprotein fixa | K7R23_00855 | B7L4G4 | Negative | 198857 - 199630 | 27477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

