Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | K7R23_00660 | P00893 | Negative | 150301 - 152025 | 62671.7 |
| transcriptional regulator leuo | K7R23_00665 | P46924 | Negative | 152352 - 153302 | 35805.0 |
| leu operon leader peptide | K7R23_00670 | P03062 | Positive | 153951 - 154046 | 3568.58 |
| 2-isopropylmalate synthase | K7R23_00675 | A8ALM5 | Positive | 154137 - 155708 | 57342.1 |
| 3-isopropylmalate dehydrogenase | K7R23_00680 | Q1RGC4 | Positive | 155708 - 156799 | 39605.4 |
| 3-isopropylmalate dehydratase large subunit | K7R23_00685 | B7LWE0 | Positive | 156802 - 158202 | 49807.6 |
| 3-isopropylmalate dehydratase small subunit | K7R23_00690 | A7MQ53 | Positive | 158213 - 158818 | 22551.7 |
| sugar efflux transporter | K7R23_00695 | P31675 | Negative | 158936 - 160114 | 42439.5 |
| glucose uptake inhibitor sgrt | K7R23_00700 | C1P5Z7 | Negative | 160236 - 160358 | 4923.1 |
| hth-type transcriptional regulator sgrr | K7R23_00705 | Q3Z5U2 | Positive | 160452 - 162107 | 64284.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

