Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | K7R23_00610 | Q5PDC2 | Negative | 139170 - 140486 | 46837.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | K7R23_00615 | A8ALK9 | Negative | 140489 - 141571 | 39952.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | K7R23_00620 | P11880 | Negative | 141565 - 142923 | 47190.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | K7R23_00625 | Q5PDH1 | Negative | 142920 - 144407 | 53468.8 |
| peptidoglycan glycosyltransferase ftsi | K7R23_00630 | P0AD69 | Negative | 144394 - 146151 | 63537.9 |
| cell division protein ftsl | K7R23_00635 | Q7CR84 | Negative | 146167 - 146532 | 13572.6 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | K7R23_00640 | B5F7V6 | Negative | 146529 - 147470 | 34807.8 |
| division/cell wall cluster transcriptional repressor mraz | K7R23_00645 | B5F7V5 | Negative | 147472 - 147930 | 17452.1 |
| catabolite repressor/activator | K7R23_00650 | P0ACP3 | Negative | 148545 - 149549 | 37918.4 |
| acetolactate synthase small subunit | K7R23_00655 | P21622 | Negative | 149807 - 150298 | 18062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

