Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | K7R23_00560 | B5F7X1 | Negative | 126490 - 129195 | 101754.0 |
| seca translation cis-regulator secm | K7R23_00565 | A8ALJ9 | Negative | 129257 - 129766 | 18559.4 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | K7R23_00570 | B7LWG2 | Negative | 130039 - 130956 | 33945.8 |
| cell division protein ftsz | K7R23_00575 | P0A9A8 | Negative | 131057 - 132208 | 40356.4 |
| cell division protein ftsa | K7R23_00580 | P0ABH2 | Negative | 132325 - 133587 | 45289.6 |
| cell division protein ftsq | K7R23_00585 | Q7CR81 | Negative | 133584 - 134414 | 31254.3 |
| d-alanine--d-alanine ligase | K7R23_00590 | P07862 | Negative | 134416 - 135336 | 32857.6 |
| udp-n-acetylmuramate--l-alanine ligase | K7R23_00595 | B5F7W5 | Negative | 135329 - 136804 | 53289.8 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | K7R23_00600 | A8ALK6 | Negative | 136862 - 137929 | 37752.9 |
| cell division protein ftsw | K7R23_00605 | P0ABG6 | Negative | 137926 - 139170 | 45739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

