Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | K7R23_00510 | P82974 | Negative | 118208 - 118771 | 20955.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | K7R23_00515 | P30012 | Positive | 118859 - 119752 | 32713.0 |
| prepilin peptidase-dependent pilin | K7R23_00520 | P36647 | Positive | 119951 - 120403 | 15818.0 |
| type ii secretion system protein gspe | K7R23_00525 | P36645 | Positive | 120400 - 121785 | 50504.2 |
| protein transport protein hofc | K7R23_00530 | P36646 | Positive | 121775 - 122977 | 44144.5 |
| gmp reductase | K7R23_00535 | B7LWQ6 | Negative | 123049 - 124092 | 37287.7 |
| dephospho-coa kinase | K7R23_00540 | P0A6J0 | Positive | 124318 - 124938 | 22489.1 |
| cell division protein zapd | K7R23_00545 | A8ALJ5 | Positive | 124938 - 125681 | 28374.4 |
| dna gyrase inhibitor yacg | K7R23_00550 | B7LWG6 | Positive | 125691 - 125885 | 7196.32 |
| 8-oxo-dgtp diphosphatase mutt | K7R23_00555 | P08337 | Negative | 125985 - 126383 | 14753.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

