Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber assembly protein | K7R23_02690 | P0DJY5 | Positive | 619146 - 619667 | 19926.5 |
| Tail fiber | K7R23_02695 | Q9T1V0 | Negative | 619699 - 620580 | 31268.6 |
| Hypothetical protein | K7R23_02700 | Q9T1V1 | Negative | 620580 - 621140 | 21366.4 |
| Baseplate j like protein | K7R23_02705 | Q9T1V2 | Negative | 621131 - 622213 | 38624.7 |
| Hypothetical protein | K7R23_02710 | Q9T1V3 | Negative | 622213 - 622650 | 15930.0 |
| Putative baseplate assembly protein | K7R23_02715 | Q9T1V4 | Negative | 622643 - 623257 | 22202.3 |
| Putative tail protein | K7R23_02720 | P08558 | Negative | 623247 - 624374 | 41220.6 |
| Tail/dna circulation protein | K7R23_02725 | P08557 | Negative | 624358 - 625716 | 48823.4 |
| Tail assembly protein | K7R23_02730 | Q9T1V6 | Negative | 625703 - 627760 | 71973.2 |
| Hypothetical protein | K7R23_02735 | P79680 | Negative | 627888 - 628367 | 17091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

