Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | K7R23_00360 | A4W6N6 | Positive | 82074 - 82454 | 13896.6 |
| polysaccharide deacetylase family protein | K7R23_00365 | P31666 | Negative | 82458 - 83684 | 46225.7 |
| pts sugar transporter subunit iia | K7R23_00370 | P36881 | Negative | 83770 - 84210 | 16441.9 |
| abc transporter permease | K7R23_00375 | P0AFN8 | Negative | 84316 - 85086 | 28579.1 |
| abc transporter atp-binding protein | K7R23_00380 | P36879 | Negative | 85083 - 86009 | 34729.3 |
| carbonate dehydratase | K7R23_00385 | P61517 | Positive | 86118 - 86780 | 24954.0 |
| hypoxanthine phosphoribosyltransferase | K7R23_00390 | P0A9M3 | Negative | 86840 - 87376 | 20087.4 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | K7R23_00395 | P15877 | Positive | 87582 - 89972 | 86760.9 |
| is110-like element iscro5 family transposase | K7R23_00400 | Q9HI37 | Positive | 90135 - 91145 | 38118.4 |
| multicopper oxidase cueo | K7R23_00405 | P36649 | Negative | 91453 - 93003 | 56411.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

