Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glycosyl transferase/transpeptidase | K7R23_00310 | P02919 | Negative | 70105 - 72639 | 94289.0 |
| atp-dependent helicase hrpb | K7R23_00315 | P37024 | Negative | 72771 - 75200 | 89125.2 |
| rna 2',3'-cyclic phosphodiesterase | K7R23_00320 | P37025 | Positive | 75274 - 75804 | 19688.8 |
| dna/rna nuclease sfsa | K7R23_00325 | A8ALE4 | Positive | 75817 - 76521 | 26404.6 |
| rna polymerase-binding protein dksa | K7R23_00330 | P0ABS3 | Positive | 76699 - 77154 | 17544.7 |
| trna glutamyl-q(34) synthetase gluqrs | K7R23_00335 | Q5PD33 | Positive | 77227 - 78123 | 33753.1 |
| polynucleotide adenylyltransferase pcnb | K7R23_00340 | Q8ZRQ8 | Positive | 78229 - 79626 | 53884.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | K7R23_00345 | P26281 | Positive | 79623 - 80102 | 17818.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | K7R23_00350 | B5F833 | Positive | 80221 - 81012 | 28110.1 |
| pantoate--beta-alanine ligase | K7R23_00355 | Q8Z9D3 | Positive | 81076 - 81930 | 31518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

