Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | K7R23_00260 | A7ZHQ1 | Positive | 58167 - 58865 | 24489.5 |
| vitamin b12 abc transporter substrate-binding protein btuf | K7R23_00265 | Q8ZRP7 | Positive | 58858 - 59658 | 29339.4 |
| tric cation channel family protein | K7R23_00270 | P0AFP1 | Positive | 59693 - 60316 | 22054.0 |
| iron-sulfur cluster insertion protein erpa | K7R23_00275 | B5F8R7 | Negative | 60437 - 60781 | 12100.2 |
| h(+)/cl(-) exchange transporter clca | K7R23_00280 | B5RHE1 | Negative | 60863 - 62284 | 50297.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | K7R23_00285 | B1LGV7 | Positive | 62453 - 63733 | 45373.8 |
| fe(3+)-hydroxamate abc transporter permease fhub | K7R23_00290 | O87656 | Negative | 63829 - 65811 | 70096.0 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | K7R23_00295 | P07822 | Negative | 65808 - 66698 | 33158.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | K7R23_00300 | P07821 | Negative | 66698 - 67495 | 28894.3 |
| ferrichrome porin fhua | K7R23_00305 | P06971 | Negative | 67543 - 69798 | 82624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

