Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | K7R23_00160 | A9MPI0 | Negative | 34650 - 35438 | 28124.7 |
| 3-hydroxyacyl-acp dehydratase fabz | K7R23_00165 | A7ZHS0 | Negative | 35442 - 35897 | 17043.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | K7R23_00170 | Q5PD75 | Negative | 36001 - 37026 | 36011.6 |
| molecular chaperone skp | K7R23_00175 | P0AEU9 | Negative | 37030 - 37515 | 17814.4 |
| outer membrane protein assembly factor bama | K7R23_00180 | A8ALB1 | Negative | 37638 - 40067 | 90216.0 |
| sigma e protease regulator rsep | K7R23_00185 | D0ZKX9 | Negative | 40099 - 41451 | 49021.1 |
| phosphatidate cytidylyltransferase | K7R23_00190 | P0ABG2 | Negative | 41463 - 42320 | 31473.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | K7R23_00195 | Q5PD68 | Negative | 42333 - 43091 | 28426.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | K7R23_00200 | Q8X8Y1 | Negative | 43280 - 44476 | 43440.6 |
| ribosome recycling factor | K7R23_00205 | A7ZHR2 | Negative | 44584 - 45141 | 20523.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

