Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | K7R23_00060 | Not Available | Negative | 12211 - 13528 | 46241.2 |
| porin | K7R23_00065 | Q56111 | Negative | 13661 - 14770 | 40207.8 |
| hypothetical protein | K7R23_00070 | Not Available | Negative | 15423 - 16640 | 42003.1 |
| envelope stress response activation lipoprotein nlpe | K7R23_00075 | P40710 | Negative | 17336 - 18037 | 25644.6 |
| aminoacyl-trna hydrolase | K7R23_00080 | P40711 | Negative | 18071 - 18490 | 15520.9 |
| yaeq family protein | K7R23_00085 | P0A1S7 | Negative | 18487 - 19032 | 20889.8 |
| yaep family protein | K7R23_00090 | B5F8V2 | Positive | 19221 - 19421 | 7202.58 |
| rho-binding antiterminator | K7R23_00095 | P0AFW8 | Positive | 19408 - 19668 | 9720.45 |
| trna lysidine(34) synthetase tils | K7R23_00100 | B4TYE9 | Negative | 19753 - 21051 | 48469.4 |
| voc family protein | K7R23_00105 | P52096 | Negative | 21113 - 21502 | 14678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

