Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Mu-like prophage tail protein gpp | K7R23_25135 | P08558 | Positive | 5301842 - 5303053 | 44406.9 |
| Phage-related baseplate assembly protein gp45 | K7R23_25140 | Q9T1V4 | Positive | 5303053 - 5303703 | 23081.4 |
| Hypothetical protein | K7R23_25145 | P44239 | Positive | 5303757 - 5304107 | 13046.6 |
| Baseplate j protein | K7R23_25150 | Q9T1V2 | Positive | 5304107 - 5305186 | 38593.6 |
| Tail protein | K7R23_25155 | P75982 | Positive | 5305190 - 5305762 | 21200.6 |
| Tail fiber | K7R23_25160 | P77515 | Positive | 5305762 - 5306745 | 34266.0 |
| Tail fiber assembly protein | K7R23_25165 | P03740 | Positive | 5306745 - 5307320 | 21213.6 |
| Putative tail fiber protein | K7R23_25170 | P76072 | Positive | 5307366 - 5308982 | 58386.6 |
| Tail fiber protein | K7R23_25175 | Not Available | Positive | 5308982 - 5309551 | 21347.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 7 - 122 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

