Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Mu phage uncharacterized protein | K7R23_25085 | Not Available | Positive | 5294243 - 5294575 | 12218.5 |
| Hypothetical protein | K7R23_25090 | P44230 | Positive | 5294579 - 5295010 | 16061.9 |
| Mu-like prophage protein gp37 | K7R23_25095 | Not Available | Positive | 5295019 - 5295660 | 24239.4 |
| Hypothetical protein | K7R23_25100 | Not Available | Positive | 5295674 - 5295883 | 7835.16 |
| Tail sheath protein gpl | K7R23_25105 | P79678 | Positive | 5295876 - 5297297 | 49589.1 |
| Tail tube protein | K7R23_25110 | Not Available | Positive | 5297310 - 5297684 | 13714.3 |
| hypothetical protein | K7R23_25115 | Not Available | Positive | 5297681 - 5298064 | 13855.1 |
| hypothetical protein | K7R23_25120 | Not Available | Positive | 5298079 - 5298237 | 5878.07 |
| Tail length tape measure protein | K7R23_25125 | Q6QIA5 | Positive | 5298227 - 5300509 | 81388.7 |
| Tail/dna circulation protein | K7R23_25130 | P71389 | Positive | 5300509 - 5301858 | 49085.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

