Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | K7R23_01770 | P55890 | Negative | 398844 - 399557 | 25705.2 |
| Tyrosine-type recombinase/integrase | K7R23_01775 | P0A8P9 | Negative | 399581 - 400477 | 34071.2 |
| Attr | Not Available | Not Available | Positive | 412361 - 412376 | Not Available |
| Mom | K7R23_02655 | P06018 | Negative | 613831 - 614568 | 28813.6 |
| Com | K7R23_02660 | Q38200 | Negative | 614522 - 614722 | 7723.27 |
| hypothetical protein | K7R23_02665 | Not Available | Positive | 614837 - 615300 | 17255.6 |
| Hypothetical protein | K7R23_02670 | Not Available | Negative | 615336 - 615593 | 9146.72 |
| Hypothetical protein | K7R23_02675 | Not Available | Negative | 615629 - 615811 | 6704.33 |
| Hypothetical protein | K7R23_02680 | P39370 | Negative | 615946 - 617997 | 72288.4 |
| Dna invertase | K7R23_02685 | P03015 | Negative | 618083 - 618655 | 21503.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

